Archive for August, 2009

NSF Requires RCR Training

As announced in the Federal Register,

Effective January 4, 2010, NSF will require that, at the time of proposal submission to NSF, a proposing institution’s Authorized Organizational Representative certify that the institution has a plan to provide appropriate training and oversight in the responsible and ethical conduct of research to undergraduates, graduate students, and postdoctoral researchers who will be supported by NSF to conduct research. … training plans are not required to be included in proposals submitted to NSF, institutions are advised that they are subject to review upon request.

…NSF also will modify its standard award conditions to clearly stipulate that institutions are responsible for verifying that undergraduate students, graduate students, and postdoctoral researchers supported by NSF to conduct research have received RCR training. [target date - October 1, 2009]

The Federal Register notice also summarizes public comments submitted in response to the NSF’s proposed plan back in February, and there are links to the pre-publication summary for the National Academy of Engineering’s workshop entitled Ethics Education and Scientific and Engineering Research: What’s Been Learned? What Should be Done? (NAE also has an Online Ethics Center) and the Website for an Organisation for Economic Cooperation and Development Global Science Forum workshop entitled Best Practices for Ensuring Scientific Integrity and Preventing Misconduct. UMass Amherst offers the National Digital Library for Ethics in Science and Engineering.

For those interested in working to improve ethics education for graduate students in science and engineering, the NSF has a funding opportunity available through the aptly named Ethics Education in Science and Engineering program.

The Office of Research Integrity (ORI), which resides within the Department of Health & Human Services, has taken an interest in these NSF doings, not surprisingly, and is blogging on them. I’m sure they would appreciate any and all comments you might have.

And lest any institutions think the NSF is unlikely to ever verify their verification of satisfactory completion of RCR training, I have two words for you: effort reporting.

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Why Bother with Misconduct when Bribes will do?

I had no idea there was a cottage industry helping grad students obtain their PhDs:

… students paid between euro4,000 to euro20,000 ($5,700 to $28,500) to the company [Institute for Scientific Consulting], which promised to help them get their doctorate degrees through its extensive contacts within university faculties … the company paid professors between euro2,000 to euro5,000 when their clients had successfully received their PhDs. It was not clear whether the students knew that bribes were being paid. … evidence points to the involvement of about 100 professors across the country spanning “numerous disciplines” … [and] involved universities in Frankfurt, Tuebingen, Leipzig, Rostock, Jena, Bayreuth, Ingolstadt, Hamburg, Hannover, Bielefeld, Hagen, Cologne and Berlin.

Now, the only prosecuted case thus far in this massive scandal is a Hanover law professor, “who helped students obtain a degree in exchange for financial or sexual favors” (for which he was sentenced to 3 years in prison). The AP reports that this professor “confessed in court to accepting nearly euro200,000 [$264,000] to serve as a faculty adviser to more than 60 doctorate students between 1998 and 2005. The professor said he needed the money to renovate his Hamburg mansion.”

Don’t we all.

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NIH Reviews, Reviewers … and new Director

In Science this week, Sudhansu K. Dey, PhD, suggests that the NIH Needs a Makeover to rectify a grant-making process that “has become tangled and inefficient”, mainly due to the lack of quality reviewers. Dey is not speaking as a jilted or jaded applicant, as his impressive NIH funding record demonstrates. Indeed, his concern seems to lie in the fact that his peers (in terms of funding-publications) are not the ones raising their hands to review applications, leaving SROs scrambling to fill study sections:

The Center for Scientific Review is desperate to recruit reviewers and is drafting individuals who have poor records of NIH grant awards or weak publishing histories. How can those individuals be trusted to review grants?

He suggests CSR make more use of videoconferencing to entice participation by busy established investigators, something Toni Scarpa favors as well. However, some reviewers have told me this works better for smaller groups discussing a manageable number of focused applications than for full chartered study sections covering a wide swath of science and funding mechanisms … and that they would prefer not to give up the face-to-face exchange – both to rigorously discuss applications and to network with peers.

Dey also briefly touches on the new scoring and critique system, suggesting he himself is not clear about whether the scores for individual review criteria “have any bearing on the overall score.” Having now seen a variety of summary statements from both discussed and triaged applications for different ICs and mechanisms, I myself wonder – upon reading the bulleted comments in relation to the scores given (criteria & impact) – how well these sync up in terms of the message the reviewers intend to convey. As I noted previously, CSR has a wealth of data to mine in the 20K RC1 reviews, at least in terms of whether the criteria scores match the comments made and send unambiguous feedback to the applicant.

Finally, Dey shares his Makeover advice on the next NIH Director, likely before Francis Collins’ appointment and rapid confirmation:

It is time to appoint a strong leader at NIH who has the understanding of a lifetime researcher and the authority to revolutionize the institution.

Collins is a “lifetime” researcher, perhaps, but one who has spent most of his career within rather than outside the NIH. Indeed, perhaps not surprisingly, Collins does not feel the intramural system is in need of change:

Asked about NIH’s intramural program, he said he is “resistant to the idea that [the program] is in need of some sort of dramatic redo” but is pondering whether to create a pool of intramural money that, like NIH’s Common Fund, could be used to fund crosscutting research quickly.

I suspect Dey was thinking in terms of a “lifetime” researcher who has weathered the turbulence of extramural funding and understands the reality of maintaining a lab dependent on the same. As an aside, Neil Greenspan, MD, PhD, commenting in The Scientist, wonders if Collins is out of touch with reality in a different regard, namely, the realistic potential of genomics in clinical practice. Both of these concerns are dwarfed, however, by the importance of the NIH Director’s ability to get Congress to cough up more money for the base appropriation. Given the current economic climate, Collins has a tough row to hoe here as well.

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Findings of Research Misconduct

Notice is hereby given that ORI and the Assistant Secretary for Health have taken final action in the following case:

Based on the report of an investigation conducted by Louisiana State University Health Sciences Center–Shreveport and additional analysis conducted by ORI in its oversight review, the US PHS found that Ryan M. Wolfort, MD, PhD, who was a House Officer in the Department of Surgery, and a former graduate student, Department of Molecular and Cellular Physiology, engaged in research misconduct in the reporting of research supported by grants R01HL26441 and P01HL55552.

Respondent’s research misconduct related to his dissertation research as a graduate student, which he undertook at the same time that he also was serving as a House Officer at LSUHSC-S. ORI acknowledges Dr. Wolfort’s cooperation with the LSUHSC-S misconduct proceedings.

PHS found that Dr. Wolfort engaged in research misconduct by falsifying and fabricating data reported in three publications and one manuscript that had been submitted for publication, reviewed, and returned for revision. Specifically, Dr. Wolfort falsified and fabricated data reported in research examining the contribution of immune mechanisms to early oxidative stress and endothelial dysfunction in mice with induced dietary hypercholesterolemia by:

1. Admittedly fabricating tabulations and the associated statistical analyses of RT-PCR data on Nox-2 mRNA expression in the three publications and the manuscript;

2. Falsifying data and the associated statistical claims, specifically by (a) Admittedly falsifying the measurements of endothelial function by myographic recordings of aortic ring dilation in reaction to vasoactive substances in the three papers and manuscript, (b) admittedly falsifying the measurement of cytokine by cytometric bead assay in paper 3, and (c) falsifying the measurement of superoxide production by cytochrome c reduction in papers 1 and 2, for which the underlying spreadsheet data the Respondent claims were unintentionally misrepresented, massaged, and improperly collated, but for which Respondent acknowledges that the raw data were missing for all three papers, admittedly because he intentionally erased files and discarded notebooks.

[emphasis added .... oof -writedit]

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Science Idol 2009

Oh no – my bad! I missed posting the Science Idol 2009 contest when you could vote for your cartoon of choice. You can still surf over and enjoy the 12 finalists and ponder the winning entry by Jesse Springer, a self-employed graphic designer living in Eugene, OR, whose wife is a middle school science teacher.

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Looking Ahead to FY11 Science Budget Priorities

Oh joy … bureaucraspeak at its best on the FY11 budget priorities in science and technology from Peter Orzag (OMB) and John Holdren (Obama science adviser).

Let’s see … the Administration is already investing in:

“high-risk, high-payoff research; making permanent the Research and Enterprise tax credit; targeting investment in promising clean energy technologies research; improving health outcomes while lowering costs; and nurturing a scientifically literate population as well as a world-class, diverse science, technology, engineering, and mathematics workforce.”

Phew. So what’s next?

In preparing FY2011 Budget submissions to the Office of Management and Budget, agencies should build on the science and technology priorities already reflected in the American Recovery and Reinvestment Act and the FY2010 Budget.

Hmmmmmm. Further …

Agencies should explain in their budget submissions how they will redirect available resources, as appropriate, from lower-priority areas to science and technology activities that address four practical challenges and strengthen four cross-cutting areas that underlie success in addressing all of them.

So what would these four challenges be?

  • Applying science and technology strategies to drive economic recovery, job creation, and economic growth;
  • Promoting innovative energy technologies to reduce dependence on energy imports and mitigate the impact of climate-change while creating green jobs and new businesses;
  • Applying biomedical science and information technology to help Americans live longer, healthier lives while reducing health care costs; and
  • Assuring we have the technologies needed to protect our troops, citizens, and national interests, including those needed to verify arms control and nonproliferation agreements essential to our security.

And the strategies for addressing these challenges?:

  • Increasing the productivity of our research institutions, including our research universities and major public and private laboratories and research centers;
  • Strengthening science, technology, engineering, and mathematics education at every level, from pre-college to postgraduate to lifelong learning;
  • Improving and protecting our information, communication, and transportation infrastructure, which is essential to our commerce, science, and security alike; and
  • Enhancing our capabilities in space, which are essential for communications, geopositioning, intelligence gathering, Earth observation, and national defense, as well as for increasing our understanding of the universe and our place in it.

My poverty-stricken friends at the Observatory should be happy at least. Would one of the approaches to increasing research productivity possibly involve more funding for research? Unclear, but the memo does urge Agencies to

“empower their scientists to have ongoing contact with people who know what’s involved in making and using things, from cost and competitive factors to the many practical constraints and opportunities that can arise when turning ideas into reality.”

I’m sure you’ll all appreciate this empowerment. But in the meantime, I suggest you get writing for the October-November cycle, including a missive to your Congressional delegation supporting a sustained increase in the NIH base appropriation.

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Opinions Sought on Review Process – RC1 et al.

Last week, a commenter on the RC1 thread asked for reflections on the two-stage peer review process, particularly the Editorial Boards:

Were you on an Editorial Board? I’d still love to hear more feedback on what the reviewers thought of those.

In fact, I’d love to hear more feedback on what applicants and reviewers felt about the Editorial Board review process in general. Independent of the huge numbers, short time frames and 1-2% success rate. Would you want regular study sections to use this process?

Other questions of interest to this individual (and others who have contacted me directly) include:

Was it rigorous? Did it seem like a waste of time? Were the scored apps of high quality? Did you feel rushed? Do you feel that better science got funded by the Editorial Board review process than if grants were picked by random lottery? Did the second level (after mail review) add anything?

Were new/unknown investigators at a disadvantage? Was science outside the interest/expertise of the Editorial Board members at a disadvantage?

I know some questions have come up about conflicts of interest among reviewers, which the NIH recently addressed in its Challenge Grant FAQ:

How were conflicts of interest managed for the Challenge reviews?
Given the volume of applications received and the compressed timeline for finishing the reviews, the NIH determined that it was necessary to recruit over 15,000 outstanding scientists to serve as mail reviewers (including some who would also be applicants). However, a Challenge applicant could only serve in the Challenge reviews as a mail reviewer and not as a study section member, and only for a study section(s) other than the one reviewing his/her application. Mail reviewers do not participate in the discussion or final scoring of the applications, and do not interact with other study section members.

Hmm. Except Editorial Board reviewers were asked to score applications based on the mail reviewer scores and critiques … though apparently most Editorial Board members felt they could not do so without looking at the original application … often leading to critiques of the mail reviewer critiques … and so on.

And heck, why stop at the special process used to review RC1s …. How do reviewers (and, I suppose, applicants) feel about the new review, scoring, and critique procedures?

One Editorial Board member told me that on more than one application, the mail reviewers had very divergent scores but were in agreement with their critiques/opinions, suggesting the learning curve will be steep on the uniform assignment of scores. Perhaps the NIH could use these thousands of clusters of three naive (in terms of the scoring procedure) reviewers looking at the same application to analyze patterns of score assignment against the written comments. I know just the person to write the grant application to fund this …

And what about the plan for increased use of alternatives to in-person study section meetings, which is when many of these finer points would be addressed and, of course, advocates speak out on behalf of specific applications.

Fire away, folks. The NIH needs all the feedback it can get.

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